Search results for "FTIR spectroscopy"

showing 10 items of 39 documents

Chromophore-Protein Interplay During the Phytochrome Photocycle Revealed by Step-Scan FTIR Spectroscopy

2018

Phytochrome proteins regulate many photoresponses of plants and microorganisms. Light absorption causes isomerization of the biliverdin chromophore, which triggers a series of structural changes to activate the signaling domains of the protein. However, the structural changes are elusive, and therefore the molecular mechanism of signal transduction remains poorly understood. Here, we apply two-color step-scan infrared spectroscopy to the bacteriophytochrome from Deinococcus radiodurans. We show by recordings in H2O and D2O that the hydrogen bonds to the biliverdin D-ring carbonyl become disordered in the first intermediate (Lumi-R) forming a dynamic microenvironment, then completely detach …

0301 basic medicineInfrared spectroscopyMolecular Dynamics SimulationBiochemistryCatalysis03 medical and health scienceschemistry.chemical_compoundchromophore-protein interplayColloid and Surface ChemistryBacterial ProteinsSpectroscopy Fourier Transform InfraredPeptide bondta116BiliverdinbiologyPhytochromeHydrogen bondBiliverdineta1182WaterHydrogen BondingDeinococcus radioduransGeneral ChemistryChromophorePhotochemical Processesbiology.organism_classification030104 developmental biologychemistryBiophysicsProtein Conformation beta-StrandDeinococcusPhytochromevalokemiaproteiinitSignal transductionstep-scan FTIR spectroscopyAdenylyl CyclasesJournal of the American Chemical Society
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OH-related Infrared Absorption Bands in Oxide Glasses

2005

We report the infrared activity, in the spectral region of the OH stretching modes, of different composite silicate glasses whose chemical composition is established by X-ray fluorescence measurements. The analysis of the absorption line profiles is made in terms of different spectral contributions, Gaussian in shape. The comparison with analogous spectra obtained in vitreous silica samples with impurity concentrations < 100 part per million moles is evidence of the effects of the different oxides on the vibrational properties of the OH groups. In particular, for oxide glasses a red shift of the composite band at about 3670 cm(-1), assigned to the OH stretching modes of free Si-OH groups an…

Absorption spectroscopyInfraredFTIR AbsorptionOxide glasseOxideAnalytical chemistryX-ray fluorescenceInfrared spectroscopyCondensed Matter PhysicsCondensed Matter::Disordered Systems and Neural NetworksSylanol groupsSilicateSpectral lineSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)Settore FIS/03 - Fisica Della MateriaElectronic Optical and Magnetic Materialschemistry.chemical_compoundchemistryImpurityHydroxyl groupFTIR spectroscopy.Materials ChemistryCeramics and Compositessilicate glasse
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Lysozyme Aggregation Driven by Unfolding: the Role of Metal Ions

2007

AggregationFTIR spectroscopydynamic light scatteringmetal ionSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)
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Biogenic Selenium Nanoparticles: A Fine Characterization to Unveil Their Thermodynamic Stability

2021

Among the plethora of available metal(loid) nanomaterials (NMs), those containing selenium are interesting from an applicative perspective, due to their high biocompatibility. Microorganisms capable of coping with toxic Se-oxyanions generate mostly Se nanoparticles (SeNPs), representing an ideal and green alternative over the chemogenic synthesis to obtain thermodynamically stable NMs. However, their structural characterization, in terms of biomolecules and interactions stabilizing the biogenic colloidal solution, is still a black hole that impairs the exploitation of biogenic SeNP full potential. Here, spherical and thermodynamically stable SeNPs were produced by a metal(loid) tolerant Mic…

BiocompatibilityGeneral Chemical EngineeringNanoparticle02 engineering and technologyDFT calculationsArticleMicrococcusNanomaterials03 medical and health sciencesAdsorptionbiogenic selenium nanoparticlesMoleculeGeneral Materials ScienceFourier transform infrared spectroscopyQD1-999030304 developmental biologymultivariate statistical analysischemistry.chemical_classification0303 health sciencesBiomolecule021001 nanoscience & nanotechnologyChemistryFTIR spectroscopychemistryChemical engineering<i>Micrococcus</i>thermodynamic stabilityChemical stabilityselenium nanorods0210 nano-technologyNanomaterials
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Ab initio calculations and vibrational spectroscopy on the phenylenediamine isomers

1998

Molecular orbital calculations at HF and MP2 levels have been performed using the 6-3IG** basis set for full geometry optimization of the phenylenediamine isomers. Our results show that only a transoid conformer is found for o-phenylenediamine, whereas cis and trans conformers exist for m- and p-phenylenediamine. Vibrational normal modes have been also analyzed for the gas phase and in chloroform solution, and compared with experimental data we have obtained using FTIR spectroscopy. © 1998 Elsevier Science B.V.

ChloroformChemistryInfrared spectroscopyCondensed Matter PhysicsBiochemistrychemistry.chemical_compoundAb initio quantum chemistry methodsComputational chemistryPhysical chemistryFTIR spectroscopy Geometry optimization Vibrational mode analysisMolecular orbitalPhysical and Theoretical ChemistryFourier transform infrared spectroscopyConformational isomerismCis–trans isomerismBasis set
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Microchemical surface analysis of historic copper-based coins by the combined use of FIB-FESEM-EDX, OM, FTIR spectroscopy and solid-state electrochem…

2019

[EN] A multi-technique strategy, including microscopy, spectroscopic and electrochemical techniques, is proposed to study thin corrosion layers that form on the surface of historic copper-based coins. An accurate characterisation of this external corrosion layer is important for selecting a suitable conservation and/or restoration treatment. For this purpose, a series of copper-based coins from different historical periods and provenances, which mainly exhibited atmospheric corrosion, was analysed. The morphology of the corrosion layer and the upper core of coins was studied in trenches done on coin surfaces with a focused ion beam gun, coupled to a field emission scanning electron microsco…

CupriteMaterials scienceVoltammetry of microparticlesCoinchemistry.chemical_element02 engineering and technology01 natural sciencesMicroanalysisFocused ion beamAnalytical ChemistryCorrosionlaw.inventionOptical microscopelawHeritage conservationFourier transform infrared spectroscopySpectroscopyFIB-FESEM-EDX010401 analytical chemistryMetallurgy021001 nanoscience & nanotechnologyCopper0104 chemical sciencesField emission microscopyFTIR spectroscopychemistryPINTURAvisual_artvisual_art.visual_art_mediumCorrosion products0210 nano-technologyMicrochemical Journal
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OH-related infrared bands in oxide glasses

2004

FTIR spectroscopy
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Review: "Thermal aggregation of proteins in the presence of metal ions"

2008

FTIR spectroscopyLight scatteringProtein aggregationMetal ion
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Estudio del biodeterioro en resinas alquídicas usadas como aglutinante en pinturas modernas mediante espectroscopía FTIR y pirólisis-cromatografía de…

2008

Evaluation of the alteration produced by microbiological attack on alkyd resins has been carried out by FTIR spectroscopy and Pyrolysis-Gas Chromatography/Mass Spectrometry (Py-GC/MS). The latter included the online derivatisation of alkyd resins using hexamethyldisilazane during pyrolysis. Specimens consisting of thin films of resins formed on glass slides were used. Analyses performed on the specimens in which different genera of bacteria and fungi were inoculated and allowed to grow, indicate that the attack of microorganisms encourages the scissioning of the polymeric resins and the appearance of short-chain fatty acids. IR bands ascribed to carboxylic acids appearing in samples from in…

FTIR spectroscopyResina alquídicasBiodeteriorationBinding mediaAlkyd resinBiodeterioroPy-GC-MSAglutinantes
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Role of copper and zinc ions on the heat- induced aggregation

2007

FTIR spectroscopyaggregationmetal ion
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